BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018D02LP1|AL427302
(682 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1604 1328 0.0
>3x_Contig1604
Length = 15703
Score = 1328 bits (670), Expect = 0.0
Identities = 679/682 (99%)
Strand = Plus / Minus
Query: 1 gtgtgactacttacttggtaacaagtgttctgtcactggtaaataattgatctagtttgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13497 gtgtgactacttacttggtaacaagtgttctgtcactggtaaataattgatctagtttgc 13438
Query: 61 tttatttttaagggcagatctgacatgtttcattttcagggaatcatgaagcatattcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13437 tttatttttaagggcagatctgacatgtttcattttcagggaatcatgaagcatattcac 13378
Query: 121 gtgacttgcaatggctggacacaactgcctccagacaggaaccgctataaataggaataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13377 gtgacttgcaatggctggacacaactgcctccagacaggaaccgctataaataggaataa 13318
Query: 181 gcccaccatactgtattgaattgagtaatgtacgaggatatatatgtatatatggacaca 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 13317 gcccaccatactgtattgaattgagtcatgtacgaggatatatatgtatatatggacaca 13258
Query: 241 caaccatatcgttgaatacccaatgcagaaaggaaggtgggcaagtcctatttttttaga 300
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 13257 caaccatatcgttgaatacccaatgcagataggaaggtgggcaagtcctatttttttaga 13198
Query: 301 gtttcatgttgtgatgcatgtctcttttatttagagaggagatgcctcttattcttcaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13197 gtttcatgttgtgatgcatgtctcttttatttagagaggagatgcctcttattcttcaag 13138
Query: 361 gttgaagaaaaacatgtagccattcttttctatgtcctcgaaatttggttcatcgttggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13137 gttgaagaaaaacatgtagccattcttttctatgtcctcgaaatttggttcatcgttggc 13078
Query: 421 caagagaattttttcatcgttgtagagaacccattgttcttttccttcgaccactttctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13077 caagagaattttttcatcgttgtagagaacccattgttcttttccttcgaccactttctt 13018
Query: 481 aataaatgcaacgtaatggccactgtgaactgaattacctttatggcatatgacagcagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13017 aataaatgcaacgtaatggccactgtgaactgaattacctttatggcatatgacagcagt 12958
Query: 541 tagtttatacttagcagaggcaattgacgatgctgggattccaaaactttttctggattg 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12957 cagtttatacttagcagaggcaattgacgatgctgggattccaaaactttttctggattg 12898
Query: 601 atccttccattcctcagcttcaggtaactccccgtcgtcatccatatgggagaaaaccca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12897 atccttccattcctcagcttcaggtaactccccgtcgtcatccatatgggagaaaaccca 12838
Query: 661 ttctacactggcattgacgtca 682
||||||||||||||||||||||
Sbjct: 12837 ttctacactggcattgacgtca 12816
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5869
Number of Sequences: 1807
Number of extensions: 5869
Number of successful extensions: 197
Number of sequences better than 1.0e-20: 1
length of query: 682
length of database: 10,358,551
effective HSP length: 16
effective length of query: 666
effective length of database: 10,329,639
effective search space: 6879539574
effective search space used: 6879539574
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)